Reagents
Because saying "Exonuclease-Shrimp-Alkaline-Phosphatase" takes to long
What is Exo-Sap
New Guber test that detects inherited mutations in mismatch repair genes MLH1, MSH2, MSH6, PMS2
What is Lynch Syndrome NGS/LS NGS?
This gene is formed on chromosome 22 when a piece of chromosome 9 attaches.
What is BCR-ABL
What colors of ink are allowed on official ARUP documents?
Black and Blue
Laboratory Information Management System
What is LIMS?
What is elution buffer?
Cobalt, MLPA, and Array all detect this type of mutation
What are Copy Number Variants?
What is Oncuber?
The International Organization for Standardization
This contains the flow cell ID, accession numbers, index sequences, test ordered, and worklist number.
What is the Sample Sheet?
Anything in the lab that ends in "-ase"
What is an enzyme?
DNA is comes from this cell in whole blood
What is a White Blood Cell?
A test that is ordered to predict response to tyrosine kinase inhibitor (TKI) therapy
What are KITMELAN and GISTMUT
If this hasn't been approved by the supervisor and Group Manager, you cannot proceed with validation testing.
What is a validation PLAN?
Variation in how quickly a thermocycler heats up and cools down.
What is the ramp rate?
This is a concentrated library of well-characterized bacteriophage genome.
What is PhiX?
How you know which genes are tested on which order.
What is the laboratory test directory?
During FFPE extraction, this slide is used as the template for where the tumor is found.
What is an H&E slide?
What is competency?
$5300
What is the cost of a NovaSeq Seq flow cell?
This is used to block non-specific hybridization and reduce the amplification of repetitive DNA sequences
What is Human Cot-1?
Smart, kind, hard-working, driven, friendly, calm
What are the reasons why we will miss Larrizel?
The percentage of sequence reads observed matching a specific DNA variant divided by the overall coverage at that locus.
What is VAF?
What are proficiency testing samples?
A sonicator and a dessicator.
What are the Covaris and the SpeedVac?