Annotation
BP Variants
Protein Variants
Builds & Transcripts
100

The extension used to annotate documents for ClinGen

What is Hypothes.is?

100

The notation for substitution

What is X>Y?

100

The notation for silent (no protein change)

What is Xxx123= ?

100

The role of the assembly in annotation

What is a reference?

200

The recommended library to find a gene to annotate

What is PubMed Central?

200

The way introns are referred to, positionally

What is c.X +- Y?

200

The notation for a missense variant

What is Xxx123Yyy?

200

The notation for transcripts

What is Transcript:x.Y

300

T/F: others can see highlights you create when annotating

False

300

The notation for deletion

What is X_Ydel? (including Y)

300

The notation for a nonsense mutation

Xxx123*

300

The location where the build used in a report can typically be found

What is the Methods Section?

400

The number of tags to be used for an annotation

What is all relevant?

400

The notation for insertion

What is insXYZ?

400

T/F: both the protein variant and corresponding nucleotide variant are necessary for a protein change

True

400

T/F: coding DNA changes are specific to transcripts

True

500

The way to write tags

What is CamelCase?

500

The direction nucleotides are ordered in notation

What is 5' to 3'?

500

The notation for frameshift mutations

What is Xxx123Yyyfs*Z?

500

The most common build used by clinical labs (when instructional videos were created)

What is GRCh37 and hg19?

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