Chapter 13
Chapter 14
Chapter 15
Chapter 16
Misc.
100

Define ergosterol

sterol is found in the cell membrane to protect the membrane structure, fluidity, and permeability. 

- Target for many antifungal agents

100

Why is the skin a hostile place for pathogenic organisms

physical barrier, skin dryness, acidic pH, competition with normal flora, and high salt concentration.

100

What are defensins and what is their purpose?

They are small cationic peptides that make pores in the bacterial membrane and are effective against bacteria with slight negative charges, gram-positive, gram-negative, fungi, and viruses.

100

What is the relationship between antigens, epitopes, immunogens, and haptens?

Antigen: anything that can elicit an immune response when introduced into a person

Immunogen: an antigen that can elicit an immune response/ antibody production by itself

Epitope (antigenic determinants): a specific binding site on an antigen, can have more than one

Hapten: small molecule that cannot elicit an immune response unless attached to a larger protein

100

What is the protein factor H?

Prevents activation of complement in the absence of infection.

200

What are the six basic mechanisms of antibiotic resistance?

1) destroy antibiotic

2) pump antibiotic out

3) decrease membrane permeability

4) alter the target

5) modify the antibiotic

6) protect the ribosome

200

What compartments in the body are considered sterile?

internal organs: brain, heart, liver, and kidneys

Parts of the urogenital tract

Blood

Cerebrospinal fluid

Bone and bone marrow

200

Differentiate between neutrophils, basophils, and eosinophils.

Neutrophils are the majority of the WBCs and engulf microbes by phagocytosis. Basophils and eosinophils release products toxic to the microbe and release vasoactive chemical mediators important for inflammation.

200

Differentiate between isotype, allotype and idiotype of an antibody

Isotype: the types of antibodies found in all different individuals in related species: GAMED

Allotype: the types of antibodies found within one species

Idiotype: the types of antibodies found within one individual

200

What is the main difference between toll-like receptors and nod-like receptors?

TLR detects MAMPs outside the cell, and NLR detects MAMPs made inside the cell.

300

Explain how drug resistance develops

An antibiotic-susceptible bacterial pathogen causes a disease. A spontaneous mutant that is resistant to an antibiotic arises as the cells replicate. When the patient is treated with the antibiotic, the susceptible bacteria die, but the antibiotic-resistant cells survive and multiply. The patient relapses and risks transmitting the antibiotic-resistant strain to a new person. 

300

What is dysbiosis, and give me a specific example of this term

Occurs when the balance of members of the gut microbiome is altered

example: Crohn's disease!

300

What are the organisms that can avoid phagocytosis, and how do each avoid it? (there are 4!)

Coxiella: lives within the phagosome, 

Shigella and listeria escape from the phagosome,

 Salmonella prevents phagosome-lysosome fusion, 

And Shigella triggers apoptosis.

300

Explain each of the immunoglobulin proteins that act as antibodies.

IgG:

  • Most abundant antibody in blood
  • Provides long-term immunity (memory response)
  • Can cross the placenta to protect the fetus
  • Excellent at opsonization and neutralization

IgM:

  • First antibody produced during an initial (primary) infection
  • Found mainly in blood
  • Forms a pentamer → very effective at agglutination and activating complement

IgA:

  • Found in mucosal areas (respiratory, GI, urogenital tracts)
  • Present in secretions like saliva, tears, breast milk
  • Protects body surfaces by preventing pathogen attachment

IgD:

  • Found mostly on the surface of immature B cells
  • Functions mainly as a receptor for antigen recognition
  • Plays a role in B cell activation

IgE:

  • Involved in allergic reactions and parasitic infections
  • Binds to mast cells and basophils → triggers histamine release
  • Responsible for symptoms like itching, swelling, and inflammation
300

What is the membrane attack complex pore and what is the outcome of it?

The MAC pores are formed by C5b, C6, C7, C8, and C9 to cause a massive influx of water into the cell, causing cytolysis. 

400

How do sulfonamides block folic acid formation?

replace PABA with SFA and therefore there is no synthesis

400

What are methanogens and what is their impact on weight gain?

1) H2 buildup from bacterial fermentation normally feeds back-inhibits fermentation

2) H2 oxidation by methanogens, if present, counteracts H2 buildup, allowing fermentation to continue. 

3) Fermentation end-products such as acetate and butyrate (short-chain fatty acids) are readily used by human cells, resulting in weight gain.

400

Explain the steps of acute inflammation

1) Host cells are damaged by invaders, releasing initiation factors for inflammation

2) Macrophages in local area ingest microbes and release cytokines

3) cytokines cause capillary vasodilation (capillaries become more permeable) 

4) Cytokines start the synthesis of selectins (endothelial adhesion molecules. Also produces integrins (neutrophil binding proteins) 

5) extravasation: neutrophils squeeze through and exit the bloodstream


400

Explain the process of humoral immunity vs. cell-mediated immunity.

  • Antigen-presenting cells (APCs) engulf pathogens and display antigens on their surface
  • B cells bind free antigens using their receptors
  • Humoral immunity:T-independent antigens can directly activate B cells → plasma cells
    • Plasma cells produce and secrete antibodies
    • Helper T (TH) cells assist B cells with T-dependent antigens
  • Cell-mediated immunity:
    • APCs present antigens to helper T cells and cytotoxic T (Tc) cells
    • Tc cells become activated cytotoxic T lymphocytes (CTLs)
    • CTLs locate and destroy infected host cells
    • Helper T cells also enhance activation of both B cells and Tc cells
400

What are the specific oxygen-independent and oxygen-dependent mechanisms that can digest pathogens in the phagolysosome?

Oxygen-independent: lysozyme, lactoferrin (prevents organisms from getting iron), defensins

Oxygen-dependent: oxygen radicals (superoxide, H202, hydroxyl radicals, myeloperoxidase) 

500

Which antibiotics work by destroying the integrity of the cell membrane, and how do each of them specifically do this?

Gramicidin: pokes holes in the bacterias cell membrane

Polymixin: disrupts the inner and outer membrane because of the positive charge interacting with the negatively charged membrane. (only for gram negative because they have inner and outer membranes)

500

Name the 8 primary functions of the gut microbiome

1) Ferment unused energy substrates

2) Train the immune system

3) prevent growth of pathogenic bacteria

4) regulate the development of the gut

5) Synthesize essential vitamins for the host

6) produce hormones to direct the host to store fats

7) Aid in digestion

8) gut-brain-axis: communication with the brain to influence appetite regulation, hormonal release, and liver metabolism.

500

What are the three types of cascade pathways for the complement system, and what are the outcomes of these pathways?

Classical pathway: increase and facilitate phagocytosis C1--> C9 forming MAC to burst cell

Lectin pathway: increases and facilitates phagocytosis--> skips to spontaneous clevage of C3 into C3a and b (fastest!) 

Alternative pathway: attract neutrophils to the site of infection --> synthesis of mannose-binding lectin in response to cytokines released by macrophages --> cleavage of C2 and C4

500

 What are the three different kinds of vaccines and explain each one of them

1) Killed pathogens

2) live but crippled (attenuated) strains: weakened so wont cause disease, but are not good for immunocompromised people. 

3) Inactivated microbial toxins: inactivated proteins or lipids

500

How do M cells, MALT, peyer's patches, and GALT all relate to eachother?

MALT encompasses the GALT which has Peyer's patches, and M cells are on the Peyer's patches

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