Cell Injury
Proteomics
PBL
100

What are the mechanisms of cell injury?

Mitochondrial Dysfunction- usually caused by Hypoxia, Ischemia, Radiation, and other injurious agents, causing necrosis. (ATP shortage, ROS, oxygen depletion, increased Ca2+)

Membrane Dysfunction - usually caused by ROS or other injurious agents, causing necrosis (ATP shortage, phospholipid shortage, cytoskeleton, depletion)

DNA damage like that caused by radiation can lead to Apoptosis 

Mutations/Cell Stress/Infections can lead to ER unfolded protein accumulation, Apoptosis

100

What are the two classes of GPCRs?

Heterotrimeric/Monomeric. 

Bonus: Give a pathway that uses each. 

100

What hormone is checked in pregnancy tests?

hCG

200

Compare the Morphology of a Necrotic Cell and Apoptotic cell?

Enlarged, swollen vs. Reduced Shrunken

Pyknosis, Karyorrhexis, or Karyoysis vs. Nuclear Fragmentation 

Plasma Membrane disrupted vs. intact

Cell contents are degraded and leak out vs. apoptotic bodies

Pathological vs. Physiological 

200

What phoshphorylation cascade is related with growth factors?

MAPK cascade. 

RTK activation -> Grb-2 recruit -> GEF -> RAS -> Ref -> Mek -> Erk. 

200

What are the symptoms of tetralogy of fallot?

Ventricular Septal Defect

Right Ventricular Hypertrophy

Overriding Aorta

Pulmonary Stenosis

300

What are the intracellular accumulations?

Lipids - accumulation of triglycerides

Cholesterol - cholesterolosis

Protein - proteins in pathological locaitons

Amyloid - misfolded proteins form aggregates

Hyaline Change - may accumulate as a result of intracellular or extra cellular change

Alzhimer’s Disease - amyloid accumulation 

Gout - uric acid accumulation in joints

Calcification: deposition of calcium salts, can be dystrophic (normal serum) or metastatic (hypercalcemia)

Glycogen - accumulation of glucose

Pigments - endogenous (lipofuscin) or exogenous (coal, tobacco)


300

What is the Michaelis-Menten Equation and related variables/constants?

V = Vmax[S]/([S]+Km)

Vmax = k2[E] for S>>>

kcat = k2 for S>>>, catalytic step

kcat/Km = catalytic efficiency 

300

Write the Coagulation Cascade (include factors, different names, and cofactors/mediators)

Primary Hemostasis:

1. Vasconstriction, exposure of VWF

2. Platelet Adhesion

3. Platelet Activaiton

4. Platelet Aggregation 

Secondary Hemostasis:

400

What are all the forms of cellular adaptations in response to injury? Try to name a physiological and pathological example of each. 

Hypertrophy - increased size of cells, increased production of intracellular components. Phy: increased functional demand (uterine or muscle growth). Path: cardiac ventricular hypertrophy due to hypertension

Hyperplasia - increased cell division. Phy: breast tissue proliferation at puberty. Path: benign prostatic hyperplasia

Atrophy: initial decrease in cell size and organelles, may follow with apoptosis. Phys: ovaries after menopause. Path: skeletal muscle atrophy after not being uesd

Metaplasia: cell type switching to withstand a stressor. Barrett esophagus (squamous to columnar epithelium)

Dysplasia: abnormal cells within tissue. 

400

What is the mechanism by which the GLUT1 uniporter leads to insulin release?

GLUT1 imports glucose

Glucose import means respiration, increasing ATP and NADH

ATP inhibits K(ATP) channels

K(ATP) channel depolarizes cells

Depolarization of cell leads to voltage-gated Ca2+ channel release

This leads to Ca2+ release from ER

Ca2+ release means Insulin secretion. 

500

What combination of signals can lead to Cell growth? Explain each signaling mechanism.

Outside-In, Inside-Out signals. 

Outside-In signals, activate integrins through ECM. This leads to cytoskleton changes that are pro-growth.

Inside-Out signals activate GF-RTKs or GPCRs to lead To integrin activation through talin. 

Bonus: If these signals interact with each other to modulate genetic expression to varying levels, what is it called ?