Each DNA nucleotide contains these three things
Deoxyribose, phosphate group, and nitrogenous base
Overall purpose of a PCR reaction
to amplify DNA
Purpose of the ladder/ruler/marker
Size comparison in base pairs (bp)
Reason for antibiotic in medium when inoculating
Kill the cells that do not contain the plasmids
When a group of scientists get together to discuss and share their thoughts and interpretations about a peer-reviewed article
Journal Club
Small circular extrachromosomal DNA with at least one gene naturally found in prokaryotes
plasmid
Five components required for PCR
DNA sample, primers, nucleotides, buffer, Taq polymerase
Smaller DNA fragments move ________ in the gel
Furthest/fastest
Tool used to assess purity and quantify DNA
Nanodrop
A change in the nucleotide sequence
Mutation
This type of cell contains a nucleus, DNA wrapped around proteins, and membrane-bound organelles
Eukaryotic Cell
Number of copies of DNA after 12 cycles
4096
DNA is loaded into the gel at the _______, which is _____ charged
cathode, negatively
Two differences between solid media and liquid media
1. agar vs broth
2. petri dish vs tubes
3. isolate bacteria vs produce large numbers of bacteria
Difference between genotype and phenotype
genotype: The set of genes that an organism has
phenotype: All of the organism’s observable characteristics
Five Functions of Proteins
1. Structure
2. Antibodies
3. Transport
4. Enzymes
5. Transport
The steps of PCR and the temperatures for each step
Denaturation (94-95) --> Annealing (50-56) ---> Extension (72)
The number of bands seen after a plasmid digestion with five restriction sites
Five
Units for concentration of DNA
ng/uL
Disease caused by mutations in more than one gene is called
multifactorial
The three mechanisms of horizontal gene transfer and what occurs in each
Transformation - Bacteria take up DNA from their environment
Conjugation - bacteria directly transfer genes to another cell
Transduction - phages moves genes from one cell to another
The purposes of primers
1. Locates (complementary base pairs with) the region of interest in the DNA
2. Provides a free 3’-OH to add dNTPs to
Two reasons why loading dye is added to the DNA sample
1. Allows visualization of DNA in the gel
2. Glycerol weighs down DNA
Five steps of Miniprep
1. Cell harvest
2. Lysis
3. DNA binding
4. Wash
5. Elute
Helps quantify whether a result is likely due to chance or to some factor of interest (p<0.05)
Statistical Significance